The detailed information of tRNA gene sequence


Sequence ID>WENV170012645
Genome IDASRM01015706
Search identical group
Phylum/Class[ASRM] bioreactor metagenome; day 74 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 318
End posion on genome 242
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position
nnnnnaatat
tRNA gene sequence
GTCAAGGTAGCTCAGCTGGCTAGAGCGCTGGTCTCATAAGCCGGAGGTCGAGAGTTCAAG
TCTCTCTCTTGACACCA
Downstream region at tRNA end position
tattaaaatt
Secondary structure (Cloverleaf model)
>WENV170012645	Met	CAT
                   t      ACCA tattaaaatt
                     G - C
                     T - A
                     C - G
                     A - T
                     A - T
                     G - C
                     G + T          T G
                    T     C T C T C     A
      C G A        A      | | | | |     A
    T       C T C G       G A G A G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T + G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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