The detailed information of tRNA gene sequence


Sequence ID>WENV170012686
Genome IDASRN01001057
Search identical group
Phylum/Class[ASRN] bioreactor metagenome; day 82 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 3286
End posion on genome 3211
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
nnnnaaactt
tRNA gene sequence 
AGGTCAGTAGCTCCAATGGTAGAGCGCCGGATTCCAAATCCGATGGTTGTGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
cttattcttt
Secondary structure (Cloverleaf model)
>WENV170012686	Trp	CCA
                   t      GCCA cttattcttt
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A C        A      |   | | |     G
    T       C T C G       G T G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     TGGTT
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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