The detailed information of tRNA gene sequence


Sequence ID>WENV170012705
Genome IDASRN01002778
Search identical group
Phylum/Class[ASRN] bioreactor metagenome; day 82 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 827
End posion on genome 740
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position
agagctttaa
tRNA gene sequence
GGAGAAGTACCCAAGTGGCTGAAGGGTCCGCACTCGAAATGCGGTAGGTCGTTTACGCGG
CGCGGGGGTTCAAATCCCTCCTTCTCTGttg
Downstream region at tRNA end position
aacgcttatg
Secondary structure (Cloverleaf model)
>WENV170012705	Ser	CGA
                   a      Gttg aacgcttatg
                     G + T
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | + | | |     A
    G       A C C C       G G G G G     C
    G         | | |                 T T
    C       A G G G
      T G A        T     TAGGTCGTTTACGCGGCGC
                    C - G
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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