The detailed information of tRNA gene sequence


Sequence ID>WENV170012810
Genome IDASRO01005092
Search identical group
Phylum/Class[ASRO] bioreactor metagenome; day 119 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 447
End posion on genome 358
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
nnnnnattgc
tRNA gene sequence 
GGTGAAGTGTCCGAGTGGCTGAAGGAGCTCGCCTGGAAAGCGTGTATAGGAGAAATCTTA
TCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
tacagcctac
Secondary structure (Cloverleaf model)
>WENV170012810	Ser	GGA
                   c      GCCA tacagcctac
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      T G A        G     TATAGGAGAAATCTTATC
                    C - G
                    T   T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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