The detailed information of tRNA gene sequence


Sequence ID>WENV170012899
Genome IDASRP01012559
Search identical group
Phylum/Class[ASRP] bioreactor metagenome; day 140 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 345
End posion on genome 420
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ttattctttt
tRNA gene sequence 
AGGTCAGTAGCTCCAATGGTAGAGCGCCGGATTCCAAATCCGACGGTTGGGGGTTCGAGT
CCCTCCTGGCCTGCCA
Downstream region at tRNA end position 
tnnnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170012899	Trp	CCA
                   t      GCCA tnnnnnnnnn
                     A - T
                     G - C
                     G - C
                     T + G
                     C - G
                     A - T
                     G - C          T G
                    T     C T C C C     A
      A A C        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     CGGTT
                    C   A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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