The detailed information of tRNA gene sequence


Sequence ID>WENV170012942
Genome IDASRQ01000111
Search identical group
Phylum/Class[ASRQ] bioreactor metagenome; day 168 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 176
End posion on genome 86
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
aattcagttT
tRNA gene sequence
GGAGAAGTACTCAAGTGGCTGAAGAGGTGCCCCTGCTAAGGGTATAGGTCGTTAATAGCG
GCGCGAGGGTTCAAATCCCTCCTTCTCCGTtc
Downstream region at tRNA end position
gttttcaaga
Secondary structure (Cloverleaf model)
>WENV170012942	Ser	GCT
                   T      GTtc gttttcaaga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGTTAATAGCGGCGC
                    T - A
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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