The detailed information of tRNA gene sequence


Sequence ID>WENV170012960
Genome IDASRQ01000302
Search identical group
Phylum/Class[ASRQ] bioreactor metagenome; day 168 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 4637
End posion on genome 4561
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tgaattggat
tRNA gene sequence 
GGGCCTGTAGCTCAACTGGTTAGAGCCGACCGCTCATAACGGTCTGGTTGGGGGTTCAAG
TCCCTCCGGGCCTACCA
Downstream region at tRNA end position 
tctcattctc
Secondary structure (Cloverleaf model)
>WENV170012960	Met	CAT
                   t      ACCA tctcattctc
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      C A A        A      | + | | |     A
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTT
                    G - C
                    A - T
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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