The detailed information of tRNA gene sequence


Sequence ID>WENV170012985
Genome IDASRQ01001572
Search identical group
Phylum/Class[ASRQ] bioreactor metagenome; day 168 sample from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 809
End posion on genome 734
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tttgcgaagt
tRNA gene sequence 
AGGGGTGTAGCTCAGCTGGTAGAGCATCGGTCTCCAAAACCGAGGGTCGGGGGTTCGAGT
CCCTCCGCCCCTGCCA
Downstream region at tRNA end position 
tttcgcactt
Secondary structure (Cloverleaf model)
>WENV170012985	Trp	CCA
                   t      GCCA tttcgcactt
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C
                     T + G
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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