The detailed information of tRNA gene sequence


Sequence ID>WENV170013020
Genome IDASRR01000133
Search identical group
Phylum/Class[ASRR] bioreactor metagenome; day 185 samples from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 9055
End posion on genome 8979
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ttttaagtgt
tRNA gene sequence 
GCGGTTGTAGTTTAGTTGGTTAGAATGCCTGCCTGTCACGCAGGATGTCGCGAGTTCGAG
TCTCGTCAACCGCGCCA
Downstream region at tRNA end position 
cttttgtctt
Secondary structure (Cloverleaf model)
>WENV170013020	Asp	GTC
                   t      GCCA cttttgtctt
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          T G
                    T     T G C T C     A
      T G A        A      + | | | |     G
    T       T T T G       G C G A G     C
    G       + | | +                 T T
    G       G A A T
      T T A        G     ATGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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