The detailed information of tRNA gene sequence


Sequence ID>WENV170013029
Genome IDASRR01000285
Search identical group
Phylum/Class[ASRR] bioreactor metagenome; day 185 samples from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 3531
End posion on genome 3442
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aaattggtat
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTAGGCGGGGAACCGTC
TCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
tcttgtcttt
Secondary structure (Cloverleaf model)
>WENV170013029	Ser	GGA
                   t      GCCA tcttgtcttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGGAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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