The detailed information of tRNA gene sequence


Sequence ID>WENV170013033
Genome IDASRR01000338
Search identical group
Phylum/Class[ASRR] bioreactor metagenome; day 185 samples from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 2035
End posion on genome 2124
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cgctgacgcc
tRNA gene sequence 
GGAGAGGTGGCAGAGTGGTTGAATGCACCGGTCTTGAAAACCGGCGTGCGTGCAAGCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tattttcctg
Secondary structure (Cloverleaf model)
>WENV170013033	Ser	TGA
                   c      GCCA tattttcctg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        A     CGTGCGTGCAAGCGTACC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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