The detailed information of tRNA gene sequence


Sequence ID>WENV170013035
Genome IDASRR01000411
Search identical group
Phylum/Class[ASRR] bioreactor metagenome; day 185 samples from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 4310
End posion on genome 4222
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aatttaatgt
tRNA gene sequence 
AGAGAGCTGCCAGAGTTGGTCGAATGGACCGGTTTTGAAAACCGGCGAGGTTCACGCCTC
CGGGGGTTCGAATCCCCCGCTCTCTGCCA
Downstream region at tRNA end position 
ttaacctttt
Secondary structure (Cloverleaf model)
>WENV170013035	Ser	TGA
                   t      GCCA ttaacctttt
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     C C C C C     A
    T T G A        G      | | | | |     G
  G         G A C C       G G G G G     C
  G           | | |                 T T
  T         A T G G
    C G A          A     CGAGGTTCACGCCTCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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