The detailed information of tRNA gene sequence


Sequence ID>WENV170013050
Genome IDASRR01001025
Search identical group
Phylum/Class[ASRR] bioreactor metagenome; day 185 samples from continuous culture bioreactor inoculated with sediment from the German Wadden
Species
Start position on genome 341
End posion on genome 251
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctcaaatcaa
tRNA gene sequence 
GGACAGATGGGTGAGTTGGCTGAAACCACCTCCCTGCTAAGGAGACGTACTGGCAACGGT
ACCGAGGGTTCGAATCCCTCTCTGTCCGCCA
Downstream region at tRNA end position 
tttgtttcat
Secondary structure (Cloverleaf model)
>WENV170013050	Ser	GCT
                   a      GCCA tttgtttcat
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G T G G       G A G G G     C
  G           | | |                 T T
  C         A A C C
    T G A          A     CGTACTGGCAACGGTACC
                    C   A
                    C - G
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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