The detailed information of tRNA gene sequence


Sequence ID>ENV08001942
Genome IDABOK01058119
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 1
End posion on genome 85
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGTGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACTGACTTCGAA
GGTTCGAATCCTTCCCCCACCACCA
Downstream region at tRNA end position 
tcttttctct
Secondary structure (Cloverleaf model)
>ENV08001942	Tyr	GTA
                   n      ACCA tcttttctct
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGTCACTGACTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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