The detailed information of tRNA gene sequence


Sequence ID>ENV08001943
Genome IDABOK01058878
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 109
End posion on genome 25
Amino Acid Tyr
Anticodon GTA
Upstream region at tRNA start position 
nnaataccat
tRNA gene sequence 
GGTGGGGTTCCCGAGCGGCCAAAGGGAGCAGACTGTAAATCTGCCGTCACAGACTTCGAA
GGTTCGAATCCTTCCCCCACCACCA
Downstream region at tRNA end position 
tctcttgcaa
Secondary structure (Cloverleaf model)
>ENV08001943	Tyr	GTA
                   t      ACCA tctcttgcaa
                     G - C
                     G - C
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T T C C     A
      C G A        T      | | | | |     G
    G       G C C C       G A A G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGTCACAGACTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    G T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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