The detailed information of tRNA gene sequence


Sequence ID>WENV170013386
Genome IDAUZX01000876
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 1030
End posion on genome 941
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tcatgaagct
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGATTGCACCGGTCTTGAAAACCGGCGCCGGGGCAACCCGG
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
gttcagtgtt
Secondary structure (Cloverleaf model)
>WENV170013386	Ser	TGA
                   t      GCCA gttcagtgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G T G G G     C
    G       + | | |                 T T
    T       T T G C
      T G A        A     CGCCGGGGCAACCCGGCC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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