The detailed information of tRNA gene sequence


Sequence ID>WENV170013435
Genome IDAUZX01005532
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 1067
End posion on genome 983
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gtgttttacT
tRNA gene sequence 
GTCGGGGTAGCCCAGCCTGGTAAGGCGGCAGATTCGAGATCTGTTGCTCTCGTAGCTCGG
GAGTTCGAATCTCCCCCCCGGCGTtt
Downstream region at tRNA end position 
cttatacttc
Secondary structure (Cloverleaf model)
>WENV170013435	Ser	CGA
                   T      GTtt cttatacttc
                     G - C
                     T + G
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C C C T C     A
      C G A        A      | | | | |     G
    C       C C C G       G G G A G     C
    T         | | |                 T T
    G       A G G C
      G T A        G     TGCTCTCGTAGCTC
                    G + T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       G
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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