The detailed information of tRNA gene sequence


Sequence ID>WENV170013446
Genome IDAUZX01006557
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 855
End posion on genome 944
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
gacagtctgc
tRNA gene sequence 
GGAGAGGTGGCCGAGCGGTTTAAGGCAGCAGTCTTGAAAACTGCCGTGGGCTCACGCCCA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
ccttcaatcc
Secondary structure (Cloverleaf model)
>WENV170013446	Ser	TGA
                   c      GCCA ccttcaatcc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      T T A        A     CGTGGGCTCACGCCCACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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