The detailed information of tRNA gene sequence


Sequence ID>WENV170013483
Genome IDAUZX01010920
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 306
End posion on genome 217
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
cagttggtgt
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGGGCAACCGTA
TCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ggccacgatc
Secondary structure (Cloverleaf model)
>WENV170013483	Ser	GGA
                   t      GCCA ggccacgatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TATACGGGCAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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