The detailed information of tRNA gene sequence


Sequence ID>WENV170013531
Genome IDAUZX01015434
Search identical group
Phylum/Class[AUZX] mine drainage metagenome; uppermost (B1A) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 93
End posion on genome 10
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
agccattttT
tRNA gene sequence 
GCCGAGGTGGCCCAGCGGTACGGCGCCAGACTTGAGATCTGGTTCCCTTTGTGGATCGGG
AGTTCGAATCTCCCTCTCGGCGTat
Downstream region at tRNA end position 
gttttttnnn
Secondary structure (Cloverleaf model)
>WENV170013531	Ser	TGA
                   T      GTat gttttttnnn
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C C C T C     A
        G A        G      | | | | |     G
      C     C C C G       G G G A G     C
      G       | | |                 T T
      G     C G G C
        T A        G     TTCCCTTTGTGGATC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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