The detailed information of tRNA gene sequence


Sequence ID>WENV170013587
Genome IDAUZY01003111
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 328
End posion on genome 239
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ggagaggtgt
tRNA gene sequence 
GGAGAGGTGTCCGAGCGGTCGAAGGAGCACGCCTGGAAAGTGTGTATACGGGCAACCGTA
TCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
ggccacgatc
Secondary structure (Cloverleaf model)
>WENV170013587	Ser	GGA
                   t      GCCA ggccacgatc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G C C T       G T G G G     C
    G         | | |                 T T
    T       A G G A
      C G A        G     TATACGGGCAACCGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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