The detailed information of tRNA gene sequence


Sequence ID>ENV08001948
Genome IDABOK01072236
Search identical group
Phylum/Classmosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA
Species
Start position on genome 89
End posion on genome 14
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ccaatttcgg
tRNA gene sequence 
GTCCCCATCGTCTAGAGGCCTAGGACACTGCCCTTTCACGGCTGTAACAGGGGTTCGAAT
CCCCTTGGGGACGCCA
Downstream region at tRNA end position 
ttccgataat
Secondary structure (Cloverleaf model)
>ENV08001948	Glu	TTC
                   g      GCCA ttccgataat
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T C C C C     A
      A G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     TAAC
                    C - G
                    T   T
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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