The detailed information of tRNA gene sequence


Sequence ID>WENV170013692
Genome IDAUZY01011035
Search identical group
Phylum/Class[AUZY] mine drainage metagenome; lowermost (B1B) sediment-attached strata from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 276
End posion on genome 352
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acgactacga
tRNA gene sequence 
GGAAAGGTAGCTCAGCCGGTTAGAGCACGGCACTCATAATGCCGGGGTCGAGGGTTCGAG
TCCCTCCCTTTCCACCA
Downstream region at tRNA end position 
ctatccgtcg
Secondary structure (Cloverleaf model)
>WENV170013692	Met	CAT
                   a      ACCA ctatccgtcg
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | | | | |     G
    C       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GGGTC
                    C - G
                    G - C
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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