The detailed information of tRNA gene sequence


Sequence ID>WENV170013838
Genome IDAUZZ01011015
Search identical group
Phylum/Class[AUZZ] mine drainage metagenome; submerged non-stratified mat biofilm (B2A) from acid streamer/mats thriving at Los Rueldos
Species
Start position on genome 342
End posion on genome 431
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
atgcagggaT
tRNA gene sequence 
GGGCCGGTGGCCGAGCCTGGTCGATGGCGTCTACTTTGGAGGTAGATTGCGTAGCGCAGT
CGCGAGTTCAAATCTCGCCCGGCCCACCC
Downstream region at tRNA end position 
tgcggattgg
Secondary structure (Cloverleaf model)
>WENV170013838	Pro	TGG
                   T      ACCC tgcggattgg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     C G C T C     A
    C C G A        G      | | | | |     A
  T         G C C G       G C G A G     C
  G         + | | |                 T T
  G         T G G C
    T C G A        G     TTGCGTAGCGCAGTC
                    T - A
                    C - G
                    T - A
                    A - T
                    C - G
                  T       G
                  T       A
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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