Sequence ID | >ENV08001950 |
Genome ID | ABOK01073567 |
Phylum/Class | mosquito metagenome; viral fraction from Mung bean nuclease digestion of DNA from mixed species mosquitoes collected in Mission Valley in San Diego, CA |
Species | |
Start position on genome
|
3
|
End posion on genome
|
90
|
Amino Acid
|
Ser
|
Anticodon
|
TGA
|
Upstream region at tRNA start position
|
nnnnnnnntt
|
tRNA gene sequence
|
GGAAGGATGGCCGAGTGGTTTAAGGCAACGGTCTTGAAAACCGTCGAGTGTAACAGCTCC CAGAGTTCGAATCTCTGTCCTTCCGCCA
|
Downstream region at tRNA end position
|
aattcagccg
|
Secondary structure (Cloverleaf model) | >ENV08001950 Ser TGA
t GCCA aattcagccg
G - C
G - C
A - T
A - T
G - C
G - C
A - T T A
T G T C T C A
T G A G | | | | | G
G G C C G C A G A G C
G | | | T T
T A G G C
T T A A CGAGTGTAACAGCTCC
A - T
C - G
G - C
G - C
T - A
C A
T A
T G A
|
Intron | |
Comment/Decision | |
Genome/Seq. Info. | [ENA] |