The detailed information of tRNA gene sequence


Sequence ID>WENV170013941
Genome IDAVFP01000159
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 4264
End posion on genome 4340
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
cagttacact
tRNA gene sequence 
GGAGCGGTAGTTCAGTTGGTTAGAATGCCGGCCTGTCACGCCGGAGGTCGCGGGTTCGAG
TCCCGTCCGCTCCGCCA
Downstream region at tRNA end position 
ctgtttttca
Secondary structure (Cloverleaf model)
>WENV170013941	Asp	GTC
                   t      GCCA ctgtttttca
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T T G       G C G G G     C
    G       | | | +                 T T
    G       G A A T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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