The detailed information of tRNA gene sequence


Sequence ID>WENV170013958
Genome IDAVFP01000429
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 736
End posion on genome 650
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
caacgataat
tRNA gene sequence 
GCCGAAGTGGCGGAATTGGTAGACGCGCTAGGTTCAGGGTCTAGTGGGGGTTTCCCCGTG
GAAGTTCGAGTCTTCTCTTCGGCACCA
Downstream region at tRNA end position 
aattcagaag
Secondary structure (Cloverleaf model)
>WENV170013958	Leu	CAG
                   t      ACCA aattcagaag
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T G
                    T     T C T T C     A
      T A A        G      + | | | |     G
    T       G G C G       G G A A G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGGGGGTTTCCCCGT
                    C - G
                    T - A
                    A - T
                    G - C
                    G + T
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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