The detailed information of tRNA gene sequence


Sequence ID>WENV170013961
Genome IDAVFP01000482
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 6132
End posion on genome 6222
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccgttttta
tRNA gene sequence 
GGAGAGATGGCCGAGCGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATGGGTTAATAGCCC
ATCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
agccctggga
Secondary structure (Cloverleaf model)
>WENV170013961	Ser	GCT
                   a      GCCA agccctggga
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATGGGTTAATAGCCCATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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