The detailed information of tRNA gene sequence


Sequence ID>WENV170013965
Genome IDAVFP01000595
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 5868
End posion on genome 5794
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
agcccagtgt
tRNA gene sequence 
GCCCGGGTAGCTCAGGGGTAGAGCAGTGGACTGAAAATCCTCGTGTCGGTGGTTCAAATC
CGCCCCCGGGCACCA
Downstream region at tRNA end position 
tgtttccagg
Secondary structure (Cloverleaf model)
>WENV170013965	Phe	GAA
                   t      ACCA tgtttccagg
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     G - C          T A
                    T     C C G C C     A
        G A        A      | | + | |     A
      G     C T C G       G G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GTGTC
                    G - C
                    T   T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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