The detailed information of tRNA gene sequence


Sequence ID>WENV170013967
Genome IDAVFP01000603
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 2806
End posion on genome 2898
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccgatcaaaa
tRNA gene sequence 
GGAGAGATGACCGAGTTGGCCGATGGTGCTCGCCTGCTAAGCGAGTGTGGGGATAACACT
CCACCGAGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
atcatcacct
Secondary structure (Cloverleaf model)
>WENV170013967	Ser	GCT
                   a      GCCA atcatcacct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    T T G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G         + | | |                 T T
  C         T G G T
    C G A          G     TGTGGGGATAACACTCCACC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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