The detailed information of tRNA gene sequence


Sequence ID>WENV170013971
Genome IDAVFP01000780
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 1052
End posion on genome 976
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcccaaacat
tRNA gene sequence 
CGGGGTGTAGCTCAGCCTGGTAGAGCACTGCCTTCGGGAGGCAGGGGCCGGAGGTTCGAA
TCCTCTCACCCCGACCA
Downstream region at tRNA end position 
ttcattccga
Secondary structure (Cloverleaf model)
>WENV170013971	Pro	CGG
                   t      ACCA ttcattccga
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T C T C C     A
      C G A        A      + | | | |     G
    C       C T C G       G G A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGCC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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