The detailed information of tRNA gene sequence


Sequence ID>WENV170013978
Genome IDAVFP01000948
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 1928
End posion on genome 2018
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gtgtgatttt
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAAAGTGTGTGTACGTCAAAAGCGT
ACCGAGGGTTCGAATCCCTCTCTCTCCGCAA
Downstream region at tRNA end position 
aagtgtaatt
Secondary structure (Cloverleaf model)
>WENV170013978	Ser	GGA
                   t      GCAA aagtgtaatt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TGTACGTCAAAAGCGTACC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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