The detailed information of tRNA gene sequence


Sequence ID>WENV170013982
Genome IDAVFP01001019
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 1230
End posion on genome 1155
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
cgtaaaagtt
tRNA gene sequence 
GGGGCTATAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGCGGTTCGATC
CCGCTTAGCTCCACCA
Downstream region at tRNA end position 
tcaatataaa
Secondary structure (Cloverleaf model)
>WENV170013982	Ala	GGC
                   t      ACCA tcaatataaa
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          C T
                    T     T C G C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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