The detailed information of tRNA gene sequence


Sequence ID>WENV170014002
Genome IDAVFP01001422
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 894
End posion on genome 818
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tggcacttgt
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCCGTCCGCTCATAACGGATTGGTCGGGGGTTCGAG
TCCCTCCGGGCCCACCA
Downstream region at tRNA end position 
cttcatattt
Secondary structure (Cloverleaf model)
>WENV170014002	Met	CAT
                   t      ACCA cttcatattt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T G A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        C     TGGTC
                    G + T
                    T - A
                    C - G
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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