The detailed information of tRNA gene sequence


Sequence ID>WENV170014003
Genome IDAVFP01001487
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 2605
End posion on genome 2694
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttggttcctc
tRNA gene sequence 
GGAGGGATGCCGGAGCGGTCGAACGGGGCGGTCTCGAAAACCGTTGTGGGTGCAAGCCCA
CCGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
ccatcaccct
Secondary structure (Cloverleaf model)
>WENV170014003	Ser	CGA
                   c      GCCA ccatcaccct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G A G G G     C
    G         | | |                 T T
    T       A C G G
      C G A        G     TGTGGGTGCAAGCCCACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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