The detailed information of tRNA gene sequence


Sequence ID>WENV170014004
Genome IDAVFP01001490
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 988
End posion on genome 1064
Amino Acid Ile
Anticodon GAT
Upstream region at tRNA start position 
gcgcgtgatc
tRNA gene sequence 
GGGCCTGTAGCTCAGTTGGTTAGAGCGCACGCCTGATAAGCGTGAGGTCGGTAGTTCGAA
TCTACCCAGGCCCACCA
Downstream region at tRNA end position 
tgctcacgcg
Secondary structure (Cloverleaf model)
>WENV170014004	Ile	GAT
                   c      ACCA tgctcacgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T - A
                     G - C          T A
                    T     C C A T C     A
      T G A        A      | | | | |     G
    T       C T C G       G G T A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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