The detailed information of tRNA gene sequence


Sequence ID>WENV170014007
Genome IDAVFP01001555
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 507
End posion on genome 431
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
taaaattttt
tRNA gene sequence 
GGGCCTATAGCTCAGTTGGTTAGAGCACCTGACTCATAATCAGGTGGTCCCTGGTTCGAA
TCCAGGTGGGCCCACAA
Downstream region at tRNA end position 
aaagagagcc
Secondary structure (Cloverleaf model)
>WENV170014007	Met	CAT
                   t      ACAA aaagagagcc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          T A
                    T     G G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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