The detailed information of tRNA gene sequence


Sequence ID>WENV170014017
Genome IDAVFP01001855
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 2232
End posion on genome 2306
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ccgtcatttt
tRNA gene sequence 
GGGGCCATAGCTCAGCTGGCTAGAGCGTTTGACTGGCAGTCAAGAGGTCGGGGGTTCGAC
TCCCCCTGGCTCCACtt
Downstream region at tRNA end position 
tttggcctca
Secondary structure (Cloverleaf model)
>WENV170014017	Ala	GGC
                   t      ACtt tttggcctca
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     A - T          T C
                    T     C C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    T + G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       G
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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