The detailed information of tRNA gene sequence


Sequence ID>WENV170014021
Genome IDAVFP01002127
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 970
End posion on genome 1045
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
ccttttgcgc
tRNA gene sequence 
GGGCCCTTAGCTCAGCCGGGAGAGCGCCTGCTTTGCAAGCAGGAGGTCGCCGGTTCGATC
CCGGCAGGGTCCACCA
Downstream region at tRNA end position 
ctcttcttgt
Secondary structure (Cloverleaf model)
>WENV170014021	Ala	TGC
                   c      ACCA ctcttcttgt
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A          C T
                    T     C G G C C     A
      C G A        A      | | | | |     G
    C       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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