The detailed information of tRNA gene sequence


Sequence ID>WENV170014036
Genome IDAVFP01003088
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 1257
End posion on genome 1182
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgcgcggttc
tRNA gene sequence 
GGGGCCGTAGCTCAGTCGGGAGAGCGCGTCGTTCGCAATGACGAGGTCAGGGGTTCGATT
CCCCTCGGCTCCACCA
Downstream region at tRNA end position 
tttccataat
Secondary structure (Cloverleaf model)
>WENV170014036	Ala	CGC
                   c      ACCA tttccataat
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     C - G
                     G - C          T T
                    T     T C C C C     A
      T G A        A      | | | | |     G
    C       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    G - C
                    T - A
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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