The detailed information of tRNA gene sequence


Sequence ID>WENV170014055
Genome IDAVFP01003992
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 409
End posion on genome 485
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccttgcccgc
tRNA gene sequence 
GGCGGTGTAGCTCAGCCGGTTAGAGCAGAGGAATCATAATCCTTGTGTCGGGGGTTCGAG
TCCCTCCACCGCTACCA
Downstream region at tRNA end position 
tacttttgcc
Secondary structure (Cloverleaf model)
>WENV170014055	Met	CAT
                   c      ACCA tacttttgcc
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C T C C C     A
      C G A        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     GTGTC
                    G + T
                    A - T
                    G - C
                    G - C
                    A - T
                  A       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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