The detailed information of tRNA gene sequence


Sequence ID>WENV170014069
Genome IDAVFP01005270
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 529
End posion on genome 441
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
cgaatcatac
tRNA gene sequence 
GCCCGGATGGTGGAATTGGTAGACACGCAGGACTTAAAATCCTGTGACCCTCATCGGTCG
TGCGGGTTCAAGTCCCGCTCCGGGTACTA
Downstream region at tRNA end position 
ctatacagtt
Secondary structure (Cloverleaf model)
>WENV170014069	Leu	TAA
                   c      ACTA ctatacagtt
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T          T G
                    T     C G C C C     A
      T A A        G      | | | | |     A
    T       G G T G       G C G G G     C
    G         | | |                 T T
    G       A C A C
      T A G        G     TGACCCTCATCGGTCGT
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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