The detailed information of tRNA gene sequence


Sequence ID>WENV170014081
Genome IDAVFP01005750
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 1165
End posion on genome 1091
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
nnnnnnnnnc
tRNA gene sequence 
GGTCCGTTCGTCTAGGGGTTAGGACGCCAGGTTTTCATCCTGGTAACAGGGGTTCGATTC
CCCTACGGAGTGCAA
Downstream region at tRNA end position 
ctttttaatg
Secondary structure (Cloverleaf model)
>WENV170014081	Glu	TTC
                   c      GCAA ctttttaatg
                     G + T
                     G   G
                     T - A
                     C - G
                     C - G
                     G - C
                     T - A          T T
                    T     T C C C C     A
      G G A        C      | | | | |     G
    G       T C T G       A G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     TAAC
                    C - G
                    C - G
                    A - T
                    G - C
                    G - C
                  T       T
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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