The detailed information of tRNA gene sequence


Sequence ID>WENV170014103
Genome IDAVFP01008194
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 352
End posion on genome 441
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gcatggccaa
tRNA gene sequence 
GGAGAGGTGGCCGAGTGGTCGAAGGCGCACGCCTGGAACGCGTGTAGGCGGGAAACCGTC
TCCAGGGTTCGAATCCCTGTCTCTCCGCCA
Downstream region at tRNA end position 
cttgccccca
Secondary structure (Cloverleaf model)
>WENV170014103	Ser	GGA
                   a      GCCA cttgccccca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G + T          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G C C G       C A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TAGGCGGGAAACCGTCTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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