The detailed information of tRNA gene sequence


Sequence ID>WENV170014104
Genome IDAVFP01008219
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 780
End posion on genome 704
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ctcccgtact
tRNA gene sequence 
GGGCCTGTAGCTCAATTGGTTAGAGCAGAGCGCTCATAACGCTTTGGTTGGGGGTTCGAG
TCCCTCCGGGCCTACCA
Downstream region at tRNA end position 
gacccccgaa
Secondary structure (Cloverleaf model)
>WENV170014104	Met	CAT
                   t      ACCA gacccccgaa
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     G - C          T G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     TGGTT
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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