The detailed information of tRNA gene sequence


Sequence ID>WENV170014110
Genome IDAVFP01008843
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 634
End posion on genome 558
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccgacctcac
tRNA gene sequence 
GCGGTTGTAGCTCAGTTGGTTAGAGTACCGGCCTGTCACGCCGGGGGTCGCGGGTTCGAG
CCCCGTCAACCGCGCCA
Downstream region at tRNA end position 
ccctttcccc
Secondary structure (Cloverleaf model)
>WENV170014110	Asp	GTC
                   c      GCCA ccctttcccc
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A
                     T - A
                     G - C          C G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        A     GGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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