The detailed information of tRNA gene sequence


Sequence ID>WENV170014122
Genome IDAVFP01012809
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 252
End posion on genome 163
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
caatactcac
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAGCAGTTTGCTAAACTGCCGTACCCGTAAGGGTA
CCGGGGGTTCGAATCCCCCCCTCTCCGCGA
Downstream region at tRNA end position 
tttttgcccc
Secondary structure (Cloverleaf model)
>WENV170014122	Ser	GCT
                   c      GCGA tttttgcccc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CGTACCCGTAAGGGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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