The detailed information of tRNA gene sequence


Sequence ID>WENV170014142
Genome IDAVFP01017244
Search identical group
Phylum/Class[AVFP] microbial mat metagenome; pink berry consortia of the Sippewissett salt marsh
Species
Start position on genome 391
End posion on genome 481
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
accggttagt
tRNA gene sequence 
GGAGACGTGGCCGAGTGGTCGAAGGCGCTCCCCTGCTAAGGGAGTATACCTCAAAAGGGT
ATCGAGGGTTCGAATCCCTTCGTCTCCGCCA
Downstream region at tRNA end position 
gccttctttn
Secondary structure (Cloverleaf model)
>WENV170014142	Ser	GCT
                   t      GCCA gccttctttn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      + | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    T       A G G C
      C G A        G     TATACCTCAAAAGGGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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