The detailed information of tRNA gene sequence


Sequence ID>WENV170014315
Genome IDAYRE01000024
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 1520
End posion on genome 1444
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
catatatatT
tRNA gene sequence 
AACGAAGTGGAGCAGTTAGGAGTGCTCGCCGGGCTCATAACCCGGAGGTCAGTGGTTCAA
ATCCACTCTTCGTTATtt
Downstream region at tRNA end position 
tttcaattct
Secondary structure (Cloverleaf model)
>WENV170014315	Met	CAT
                   T      ATtt tttcaattct
                     A - T
                     A - T
                     C - G
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     T C A C C     A
    T T G A        G      | | | | |     A
  A         C G A G       A G T G G     C
  G         | | | |                 T T
  G         G C T C
    A G T          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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