The detailed information of tRNA gene sequence


Sequence ID>WENV170014317
Genome IDAYRE01000032
Search identical group
Phylum/Class[AYRE] bioreactor metagenome; day 6 sample from continuous culture bioreactor with low C:N ratio inoculated with sediment
Species
Start position on genome 13314
End posion on genome 13241
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ttgaagtgat
tRNA gene sequence 
GAGGACTTAGCTCAGTTGGTAGAGCACTGCCCTGAAGAGGCAGGGGTCCGGGGTTCAAGT
CCCTGAGTTCTCACtt
Downstream region at tRNA end position 
ttttaaaatt
Secondary structure (Cloverleaf model)
>WENV170014317	Phe	GAA
                   t      ACtt ttttaaaatt
                     G - C
                     A - T
                     G - C
                     G + T
                     A - T
                     C - G
                     T - A          T G
                    T     G T C C C     A
      T G A        A      | + | | |     A
    T       C T C G       C G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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